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  • Top cofit genes for Atu4538 from Agrobacterium fabrum C58

    3-carboxy-cis,cis-muconate cycloisomerase
    SEED: 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
    KEGG: 3-carboxy-cis,cis-muconate cycloisomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4547 3-oxoadipate CoA-transferase subunit A 0.77 0.90
    2 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.68 0.90
    3 Atu4548 3-oxoadipate CoA-transferase subunit B 0.70 0.89
    4 Atu4549 beta-ketoadipyl CoA thiolase 0.76 0.89
    5 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.59 0.85
    6 Atu4541 carboxymuconolactone decarboxylase 0.36 0.70
    7 Atu4543 LysR family transcriptional regulator 0.61 0.65
    8 Atu4546 IclR family transcriptional regulator no 0.50
    9 Atu4540 protocatechuate 3,4-dioxygenase subunit beta 0.56 0.49
    10 Atu4529 hypothetical protein no 0.47
    11 Atu4533 amino acid ABC transporter ATPase/permease no 0.45
    12 Atu4531 3-dehydroquinate dehydratase no 0.45
    13 Atu4534 amino acid ABC transporter substrate-binding protein no 0.45
    14 Atu4536 amino acid ABC transporter permease no 0.40
    15 Atu4532 shikimate 5-dehydrogenase no 0.38
    16 Atu4517 branched chain amino acid ABC transporter permease no 0.37
    17 Atu4537 amino acid ABC transporter permease no 0.35
    18 Atu4535 amino acid ABC transporter substrate-binding protein no 0.35
    19 Atu0536 hypothetical protein no 0.34
    20 Atu0803 pyruvate,orthophosphate dikinase no 0.31

    Or look for negative cofitness