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  • Top cofit genes for Atu4536 from Agrobacterium fabrum C58

    amino acid ABC transporter permease
    SEED: polar amino acid ABC transporter, inner membrane subunit
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4529 hypothetical protein no 0.76
    2 Atu4533 amino acid ABC transporter ATPase/permease no 0.70
    3 Atu4534 amino acid ABC transporter substrate-binding protein no 0.69
    4 Atu4531 3-dehydroquinate dehydratase no 0.68
    5 Atu4535 amino acid ABC transporter substrate-binding protein no 0.60
    6 Atu4537 amino acid ABC transporter permease no 0.57
    7 Atu4532 shikimate 5-dehydrogenase no 0.56
    8 Atu4539 protocatechuate 3,4-dioxygenase alpha chain no 0.50
    9 Atu4548 3-oxoadipate CoA-transferase subunit B no 0.48
    10 Atu4547 3-oxoadipate CoA-transferase subunit A no 0.46
    11 Atu4542 beta-ketoadipate enol-lactone hydrolase no 0.44
    12 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase no 0.40
    13 Atu4540 protocatechuate 3,4-dioxygenase subunit beta no 0.40
    14 Atu4543 LysR family transcriptional regulator no 0.39
    15 Atu4549 beta-ketoadipyl CoA thiolase no 0.39
    16 Atu0322 enoyl CoA hydratase no 0.31
    17 Atu4541 carboxymuconolactone decarboxylase no 0.31
    18 Atu4546 IclR family transcriptional regulator no 0.27
    19 Atu1748 NIFU-like protein no 0.23
    20 Atu4097 L-aspartate oxidase no 0.20

    Or look for negative cofitness