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  • Top cofit genes for Atu4536 from Agrobacterium fabrum C58

    amino acid ABC transporter permease
    SEED: polar amino acid ABC transporter, inner membrane subunit
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4529 hypothetical protein no 0.75
    2 Atu4533 amino acid ABC transporter ATPase/permease no 0.69
    3 Atu4534 amino acid ABC transporter substrate-binding protein no 0.68
    4 Atu4531 3-dehydroquinate dehydratase no 0.67
    5 Atu4535 amino acid ABC transporter substrate-binding protein no 0.59
    6 Atu4537 amino acid ABC transporter permease no 0.56
    7 Atu4532 shikimate 5-dehydrogenase no 0.55
    8 Atu4539 protocatechuate 3,4-dioxygenase alpha chain no 0.49
    9 Atu4548 3-oxoadipate CoA-transferase subunit B no 0.48
    10 Atu4547 3-oxoadipate CoA-transferase subunit A no 0.45
    11 Atu4542 beta-ketoadipate enol-lactone hydrolase no 0.44
    12 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase no 0.40
    13 Atu4540 protocatechuate 3,4-dioxygenase subunit beta no 0.40
    14 Atu4549 beta-ketoadipyl CoA thiolase no 0.39
    15 Atu4543 LysR family transcriptional regulator no 0.39
    16 Atu0322 enoyl CoA hydratase no 0.31
    17 Atu4541 carboxymuconolactone decarboxylase no 0.31
    18 Atu4546 IclR family transcriptional regulator no 0.27
    19 Atu1748 NIFU-like protein no 0.22
    20 Atu4097 L-aspartate oxidase no 0.20

    Or look for negative cofitness