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  • Top cofit genes for Atu4534 from Agrobacterium fabrum C58

    amino acid ABC transporter substrate-binding protein
    SEED: ABC transporter substrate-binding protein
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4529 hypothetical protein no 0.83
    2 Atu4531 3-dehydroquinate dehydratase no 0.80
    3 Atu4533 amino acid ABC transporter ATPase/permease no 0.78
    4 Atu4536 amino acid ABC transporter permease no 0.68
    5 Atu4535 amino acid ABC transporter substrate-binding protein no 0.68
    6 Atu4537 amino acid ABC transporter permease no 0.63
    7 Atu4532 shikimate 5-dehydrogenase no 0.59
    8 Atu4548 3-oxoadipate CoA-transferase subunit B no 0.55
    9 Atu4539 protocatechuate 3,4-dioxygenase alpha chain no 0.55
    10 Atu4547 3-oxoadipate CoA-transferase subunit A no 0.52
    11 Atu4542 beta-ketoadipate enol-lactone hydrolase no 0.50
    12 Atu4549 beta-ketoadipyl CoA thiolase no 0.45
    13 Atu4543 LysR family transcriptional regulator no 0.45
    14 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase no 0.45
    15 Atu0322 enoyl CoA hydratase no 0.35
    16 Atu4540 protocatechuate 3,4-dioxygenase subunit beta no 0.33
    17 Atu4541 carboxymuconolactone decarboxylase no 0.33
    18 Atu4546 IclR family transcriptional regulator no 0.25
    19 Atu1748 NIFU-like protein no 0.20
    20 Atu0405 long-chain-fatty-acid-CoA-ligase no 0.19

    Or look for negative cofitness