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  • Top cofit genes for Atu4516 from Agrobacterium fabrum C58

    branched chain amino acid ABC transporter ATPase
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4517 branched chain amino acid ABC transporter permease no 0.43
    2 Atu4519 branched amino acid ABC transporter substrate-binding protein 0.37 0.41
    3 Atu4515 branched chain amino acid ABC transporter ATPase 0.26 0.39
    4 Atu4547 3-oxoadipate CoA-transferase subunit A 0.26 0.30
    5 Atu4539 protocatechuate 3,4-dioxygenase alpha chain no 0.30
    6 Atu4543 LysR family transcriptional regulator no 0.28
    7 Atu4549 beta-ketoadipyl CoA thiolase no 0.28
    8 Atu4542 beta-ketoadipate enol-lactone hydrolase no 0.28
    9 Atu4548 3-oxoadipate CoA-transferase subunit B no 0.28
    10 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase no 0.26
    11 Atu4540 protocatechuate 3,4-dioxygenase subunit beta no 0.24
    12 Atu4541 carboxymuconolactone decarboxylase no 0.19
    13 Atu4518 branched chain amino acid ABC transporter permease 0.30 0.19
    14 Atu2672 hypothetical protein no 0.18
    15 Atu2568 thiamine biosynthesis oxidoreductase no 0.16
    16 Atu2045 HFLK protein no 0.16
    17 Atu2308 d-beta-hydroxybutyrate dehydrogenase no 0.15
    18 Atu5445 oxidoreductase no 0.15
    19 Atu5493 hypothetical protein no 0.15
    20 Atu4004 LysR family transcriptional regulator no 0.15

    Or look for negative cofitness