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  • Top cofit genes for Atu4515 from Agrobacterium fabrum C58

    branched chain amino acid ABC transporter ATPase
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4517 branched chain amino acid ABC transporter permease 0.62 0.49
    2 Atu4519 branched amino acid ABC transporter substrate-binding protein 0.59 0.47
    3 Atu4516 branched chain amino acid ABC transporter ATPase 0.26 0.39
    4 Atu4549 beta-ketoadipyl CoA thiolase 0.42 0.31
    5 Atu4518 branched chain amino acid ABC transporter permease 0.68 0.31
    6 Atu4539 protocatechuate 3,4-dioxygenase alpha chain 0.56 0.30
    7 Atu4547 3-oxoadipate CoA-transferase subunit A 0.59 0.30
    8 Atu4542 beta-ketoadipate enol-lactone hydrolase 0.59 0.29
    9 Atu4538 3-carboxy-cis,cis-muconate cycloisomerase no 0.29
    10 Atu4548 3-oxoadipate CoA-transferase subunit B 0.59 0.28
    11 Atu4543 LysR family transcriptional regulator 0.50 0.25
    12 Atu4540 protocatechuate 3,4-dioxygenase subunit beta 0.59 0.25
    13 Atu0908 transcriptional regulator no 0.20
    14 Atu4541 carboxymuconolactone decarboxylase 0.55 0.19
    15 Atu0692 glutathione-regulated potassium-efflux system protein no 0.19
    16 Atu1967 hypothetical protein no 0.18
    17 Atu0251 hypothetical protein no 0.17
    18 Atu4505 LacI family transcriptional regulator no 0.17
    19 Atu0601 oxidoreductase no 0.17
    20 Atu3822 hypothetical protein no 0.16

    Or look for negative cofitness