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  • Top cofit genes for Atu4454 from Agrobacterium fabrum C58

    RpiR family transcriptional regulator
    SEED: Transcriptional regulator, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3360 amino acid ABC transporter ATPase/permease no 0.25
    2 Atu8167 putative transmembrane protein no 0.24
    3 Atu4258 oligopeptide ABC transporter permease no 0.24
    4 Atu1357 hypothetical protein no 0.24
    5 Atu1422 transcriptional regulator, MarR family no 0.24
    6 Atu6021 D-nopaline dehydrogenase no 0.22
    7 Atu3618 hypothetical protein no 0.22
    8 Atu6020 conserved hypothetical protein no 0.22
    9 Atu3654 hypothetical protein no 0.22
    10 Atu0163 tonB protein no 0.21
    11 Atu1356 hypothetical protein no 0.21
    12 Atu6019 D-nopaline dehydrogenase no 0.21
    13 Atu6017 NAD/NADP octopine/nopaline dehydrogenase no 0.21
    14 Atu1447 two component sensor kinase no 0.20
    15 Atu3777 hypothetical protein no 0.20
    16 Atu0161 biopolymer transport protein no 0.20
    17 Atu1417 enoyl-CoA hydratase no 0.20
    18 Atu6016 ornithine cyclodeaminase no 0.20
    19 Atu0269 exodeoxyribonuclease VII large subunit no 0.19
    20 Atu6018 arginase no 0.19

    Or look for negative cofitness