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  • Top cofit genes for Atu4435 from Agrobacterium fabrum C58

    oligopeptide ABC transporter ATPase
    SEED: Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0138 surfeit 1 no 0.36
    2 Atu3279 methanesulfonate sulfonatase no 0.35
    3 Atu3744 ABC transporter permease no 0.34
    4 Atu1780 ATP-dependent DNA helicase no 0.34
    5 Atu0050 two component response regulator no 0.34
    6 Atu0143 MFS permease no 0.33
    7 Atu3908 GntR family transcriptional regulator no 0.33
    8 Atu4431 oligopeptide ABC transporter substrate-binding protein 0.36 0.32
    9 Atu1705 SEC-independent protein translocase protein no 0.32
    10 Atu0051 two component sensor kinase no 0.32
    11 Atu1468 hypothetical protein no 0.32
    12 Atu1242 cytochrome oxidase assembly factor 0.33 0.31
    13 Atu4433 oligopeptide ABC transporter permease no 0.30
    14 Atu0101 cytochrome c no 0.30
    15 Atu2464 formyltetrahydrofolate deformylase no 0.30
    16 Atu1327 NADH-ubiquinone oxidoreductase 0.30 0.30
    17 Atu1778 transcription-repair coupling factor no 0.29
    18 Atu1417 enoyl-CoA hydratase no 0.29
    19 Atu4432 oligopeptide ABC transporter permease 0.39 0.29
    20 Atu8040 hypothetical protein no 0.29

    Or look for negative cofitness