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  • Top cofit genes for Atu4394 from Agrobacterium fabrum C58

    hypothetical protein
    SEED: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
    KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4381 nitrite reductase, NirV no 0.29
    2 Atu4412 rhizobiocin/RTX toxin no 0.27
    3 Atu2217 hypothetical protein no 0.27
    4 Atu0613 ABC transporter, membrane spanning protein no 0.24
    5 Atu2001 excinuclease ABC subunit B 0.34 0.23
    6 Atu3206 hypothetical protein no 0.22
    7 Atu4403 anion ABC transporter ATPase no 0.21
    8 Atu4067 hypothetical protein no 0.21
    9 Atu0658 phosphate permease no 0.21
    10 Atu5537 mercuric reductase no 0.21
    11 Atu4367 LysR family transcriptional regulator no 0.21
    12 Atu1778 transcription-repair coupling factor no 0.21
    13 Atu0648 hypothetical protein no 0.21
    14 Atu1338 3-oxoacyl-(acyl carrier protein) reductase no 0.20
    15 Atu2284 hypothetical protein no 0.20
    16 Atu4408 nitrate reductase catalytic subunit 0.91 0.20
    17 Atu2413 ABC transporter, membrane spanning protein (urea/amide) no 0.20
    18 Atu1513 ABC excinuclease subunit A 0.31 0.20
    19 Atu5111 conjugal transfer protein no 0.20
    20 Atu4125 branched chain amino acid ABC transporter ATPase no 0.20

    Or look for negative cofitness