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Cofit
Protein
Homologs
Top cofit genes for Atu4295 from
Agrobacterium fabrum C58
shikimate 5-dehydrogenase
KEGG: shikimate dehydrogenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu4296
dehydrogenase
no
0.83
2
Atu4297
AraC family transcriptional regulator
no
0.75
3
Atu3280
GntR family transcriptional regulator
no
0.45
4
Atu0590
transcriptional regulator repressor
no
0.45
5
Atu4128
GMC type oxidoreductase
no
0.44
6
Atu2495
flavoprotein oxidoreductase
0.13
0.43
7
Atu2532
transcriptional regulator, MarR family
no
0.40
8
Atu1851
BolA/YrbA family protein
no
0.36
9
Atu1463
glycine cleavage system component H
no
0.35
10
Atu1464
glycine cleavage system T protein, aminomethyltransferase
no
0.35
11
Atu3898
DeoR family transcriptional regulator
0.29
0.29
12
Atu1462
glycine cleavage system protein P2
0.28
0.28
13
Atu3232
hydroxypyruvate reductase
no
0.28
14
Atu0300
methyltransferase
no
0.28
15
Atu4083
aldose epimerase
no
0.26
16
Atu0062
transcriptional regulator, ROK family
no
0.26
17
Atu1286
hypothetical protein
no
0.25
18
Atu0770
cytochrome C oxidase assembly protein
no
0.24
19
Atu3577
transcriptional regulator
no
0.24
20
Atu3624
stress induced morphogen
no
0.24
Or look for
negative cofitness