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  • Top cofit genes for Atu4259 from Agrobacterium fabrum C58

    oligopeptide ABC transporter substrate-binding protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4258 oligopeptide ABC transporter permease 0.99 0.46
    2 Atu4257 oligopeptide ABC transporter permease 0.57 0.36
    3 Atu4256 oligopeptide ABC transporter ATPase 0.37 0.32
    4 Atu6131 TraR Antiactivator no 0.30
    5 Atu6021 D-nopaline dehydrogenase no 0.28
    6 Atu6019 D-nopaline dehydrogenase 0.18 0.27
    7 Atu0784 hypothetical protein no 0.27
    8 Atu0751 ABC transporter, nucleotide binding/ATPase protein (cobalt) no 0.26
    9 Atu4157 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 0.67 0.26
    10 Atu6150 P-450 monooxygenase no 0.25
    11 Atu0161 biopolymer transport protein no 0.25
    12 Atu8167 putative transmembrane protein no 0.24
    13 Atu2517 ABC transporter, membrane spanning protein (dipeptide) no 0.24
    14 Atu4055 endo-1,3-1,4-beta-glycanase no 0.24
    15 Atu1422 transcriptional regulator, MarR family no 0.24
    16 Atu1417 enoyl-CoA hydratase no 0.24
    17 Atu4113 dipeptide ABC transporter substrate-binding protein 0.61 0.23
    18 Atu3654 hypothetical protein no 0.23
    19 Atu0163 tonB protein no 0.23
    20 Atu1535 cytochrome c oxidase, FixQ chain no 0.23

    Or look for negative cofitness