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  • Top cofit genes for Atu4194 from Agrobacterium fabrum C58

    oligopeptide ABC transporter permease
    SEED: Possible rhamnose ABC transporter, permease component 2
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3135 ABC transporter permease no 0.53
    2 Atu3138 hypothetical protein no 0.46
    3 Atu3139 hypothetical protein no 0.44
    4 Atu3143 hypothetical protein no 0.43
    5 Atu4192 oligopeptide ABC transporter substrate-binding protein no 0.43
    6 Atu3137 C4-dicarboxylate-binding protein no 0.43
    7 Atu3142 5-keto-4-deoxyuronate isomerase no 0.41
    8 Atu3136 ABC transporter permease no 0.39
    9 Atu4195 oligopeptide ABC transporter ATPase no 0.37
    10 Atu3140 5-dehydro-4-deoxyglucarate dehydratase no 0.36
    11 Atu2035 acetolactate synthase, small subunit no 0.32
    12 Atu4193 oligopeptide ABC transporter permease no 0.32
    13 Atu3356 malic enzyme no 0.32
    14 Atu3141 2-deoxy-D-gluconate 3-dehydrogenase no 0.29
    15 Atu3219 dihydroxy-acid dehydratase no 0.25
    16 Atu3453 isomerase/lactonizing enzyme no 0.25
    17 Atu2719 aldose epimerase no 0.23
    18 Atu1770 glutamine synthetase no 0.23
    19 Atu1308 aspartate carbamoyl transferase catalytic subunit no 0.22
    20 Atu1688 indole-3-glycerol-phosphate synthase no 0.22

    Or look for negative cofitness