Top cofit genes for Atu4160 from Agrobacterium fabrum C58

RNA polymerase sigma factor
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu4162		two-component response regulator	0.89	0.64
2	Atu2522		agrobacterium chromosomal virulence protein B	0.14	0.41
3	Atu1238		polysaccharide export protein	no	0.40
4	Atu2521		Protein regulated by acid pH	no	0.40
5	Atu0499		hypothetical protein	no	0.39
6	Atu3777		hypothetical protein	no	0.39
7	Atu6021		D-nopaline dehydrogenase	no	0.38
8	Atu3353		mannose-1-phosphate guanylyltransferase	no	0.37
9	Atu2183		lipopolysaccharide core biosynthesis mannosyltransferase	no	0.37
10	Atu0153		transcriptional regulator, Fur family	no	0.37
11	Atu2730		beta (1-->2) glucan biosynthesis protein	no	0.37
12	Atu3311		phosphomannose isomerase	no	0.37
13	Atu6019		D-nopaline dehydrogenase	no	0.37
14	Atu4166		UDP-glucose 4-epimerase	no	0.36
15	Atu4055		endo-1,3-1,4-beta-glycanase	no	0.36
16	Atu2373		UDP-hexose transferase	no	0.35
17	Atu6020		conserved hypothetical protein	no	0.35
18	Atu0979		two component sensor kinase	no	0.35
19	Atu1645		ABC transporter, substrate binding protein	no	0.35
20	Atu3544		arsenical pump membrane protein	no	0.35

Or look for negative cofitness