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  • Top cofit genes for Atu4157 from Agrobacterium fabrum C58

    bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
    SEED: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88)
    KEGG: proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4159 AsnC family transcriptional regulator 0.95 0.48
    2 Atu6021 D-nopaline dehydrogenase no 0.40
    3 Atu6016 ornithine cyclodeaminase 0.65 0.38
    4 Atu6019 D-nopaline dehydrogenase no 0.37
    5 Atu1422 transcriptional regulator, MarR family no 0.35
    6 Atu6020 conserved hypothetical protein no 0.35
    7 Atu1780 ATP-dependent DNA helicase no 0.34
    8 Atu6017 NAD/NADP octopine/nopaline dehydrogenase no 0.33
    9 Atu1530 nitrogen fixation protein FixG 0.33 0.32
    10 Atu1251 O-acetylhomoserine sulfhydrylase 0.62 0.32
    11 Atu4055 endo-1,3-1,4-beta-glycanase no 0.32
    12 Atu0801 chromosome segregation protein no 0.32
    13 Atu0269 exodeoxyribonuclease VII large subunit 0.41 0.31
    14 Atu3908 GntR family transcriptional regulator no 0.31
    15 Atu0163 tonB protein no 0.30
    16 Atu8167 putative transmembrane protein no 0.30
    17 Atu1537 cytochrome-c oxidase, FixN chain 0.79 0.30
    18 Atu0161 biopolymer transport protein no 0.30
    19 Atu1417 enoyl-CoA hydratase no 0.30
    20 Atu6145 arabinose phosphate phosphatase no 0.29

    Or look for negative cofitness