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  • Top cofit genes for Atu4127 from Agrobacterium fabrum C58

    branched chain amino acid ABC transporter permease
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3471 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.21
    2 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha 0.47 0.20
    3 Atu3475 acetyl-CoA C-acetyltransferase 0.46 0.19
    4 Atu3478 3-methylcrotonoyl-CoA carboxylase beta subunit 0.63 0.18
    5 Atu4258 oligopeptide ABC transporter permease no 0.18
    6 Atu3473 2-oxoisovalerate dehydrogenase subunit alpha 0.47 0.18
    7 Atu3474 acyl-CoA dehydrogenase 0.48 0.18
    8 Atu3480 hydroxymethylglutaryl-CoA lyase 0.48 0.16
    9 Atu3481 enoyl-CoA hydratase 0.21 0.16
    10 Atu3335 3-methyladenine DNA glycosylase no 0.16
    11 Atu1535 cytochrome c oxidase, FixQ chain no 0.15
    12 Atu4124 branched chain amino acid ABC transporter ATPase 0.87 0.15
    13 Atu2128 acetolactate synthase large subunit no 0.15
    14 Atu1967 hypothetical protein no 0.15
    15 Atu3505 3-hydroxyisobutyryl-CoA hydrolase 0.60 0.15
    16 Atu3870 D-lactate dehydrogenase no 0.15
    17 Atu0125 peptide methionine sulfoxide reductase no 0.15
    18 Atu4419 LysR family transcriptional regulator no 0.15
    19 Atu2559 transcriptional regulator, LysR family no 0.14
    20 Atu0905 dnaK suppressor protein no 0.14

    Or look for negative cofitness