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  • Top cofit genes for Atu3901 from Agrobacterium fabrum C58

    nitrite reductase small subunit
    SEED: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
    KEGG: nitrite reductase (NAD(P)H) small subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3902 nitrite reductase large subunit 0.93 0.53
    2 Atu3903 nitrate ABC transporter ATPase no 0.50
    3 Atu3904 nitrate ABC transporter permease 0.65 0.47
    4 Atu3905 nitrate ABC transporter substrate-binding protein 0.94 0.47
    5 Atu3907 two component response regulator 0.96 0.37
    6 Atu1444 nitrogen regulation protein no 0.20
    7 Atu1445 two component sensor kinase no 0.19
    8 Atu4864 MarR family transcriptional regulator no 0.17
    9 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.17
    10 Atu3298 C4-dicarboxylate transporter DctA no 0.17
    11 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase no 0.16
    12 Atu6177 component of type IV secretion system no 0.16
    13 Atu2752 hypothetical protein no 0.16
    14 Atu3296 two component response regulator for C4-dicarboxylate transport no 0.15
    15 Atu3900 nitrate reductase large subunit 0.95 0.15
    16 Atu4859 hypothetical protein no 0.14
    17 Atu1740 acetyltransferase no 0.14
    18 Atu3171 sugar ABC transporter ATPase no 0.14
    19 Atu0332 RNA polymerase sigma-54 factor 0.66 0.14
    20 Atu4254 LacI family transcriptional regulator no 0.13

    Or look for negative cofitness