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Cofit
Protein
Homologs
Top cofit genes for Atu3795 from
Agrobacterium fabrum C58
AcrB/AcrD/AcrF family protein
SEED: RND efflux transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu3796
efflux protein
0.94
0.87
2
Atu3797
HlyD family secretion protein
0.90
0.86
3
Atu2673
hypothetical protein
0.60
0.50
4
Atu2549
transcriptional regulator, TetR family
no
0.43
5
Atu3201
TetR family transcriptional regulator
no
0.39
6
Atu2720
monofunctional biosynthesis peptidoglycan transglycosylase
no
0.32
7
Atu1134
hypothetical protein
no
0.29
8
Atu3609
1-acyl-sn-glycerol-3-phosphate acyltransferase
no
0.28
9
Atu0340
SAM dependent methyltransferase
no
0.26
10
Atu0995
hypothetical protein
no
0.25
11
Atu2379
phosphomannomutase
no
0.25
12
Atu5165
type IV secretion protein AvhB4
no
0.23
13
Atu4614
glycosyltransferase
no
0.23
14
Atu4615
glucose-1-phosphate thymidylyltransferase
0.47
0.22
15
Atu3311
phosphomannose isomerase
no
0.22
16
Atu4618
dTDP-rhamnose-3,5-epimerase
no
0.22
17
Atu3597
3-hydroxybutyryl-CoA dehydrogenase
no
0.22
18
Atu4617
dTDP-D-glucose-4,6-dehydratase
no
0.22
19
Atu0657
hypothetical protein
0.61
0.22
20
Atu2183
lipopolysaccharide core biosynthesis mannosyltransferase
no
0.21
Or look for
negative cofitness