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  • Top cofit genes for Atu3495 from Agrobacterium fabrum C58

    diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3496 hypothetical protein 0.95 0.66
    2 Atu0701 GGDEF family protein no 0.51
    3 Atu3207 diguanylate cyclase no 0.47
    4 Atu1983 hypothetical protein no 0.47
    5 Atu4490 diguanylate cyclase no 0.47
    6 Atu0700 two component sensor kinase no 0.43
    7 Atu0524 transcriptional regulator, LuxR family no 0.40
    8 Atu0525 transcriptional regulator, LuxR family no 0.39
    9 Atu6168 component of type IV secretion system, pilin subunit no 0.38
    10 Atu6164 trans-zeatin secretion protein no 0.37
    11 Atu6169 component of type IV secretion system no 0.34
    12 Atu6166 two component sensor kinase no 0.34
    13 Atu6167 component of type IV secretion system no 0.34
    14 Atu3866 hypothetical protein no 0.33
    15 Atu6170 component of type IV secretion system no 0.32
    16 Atu0219 components of type IV pilus no 0.32
    17 Atu1631 two component response regulator no 0.31
    18 Atu6178 two component response regulator no 0.29
    19 Atu6174 component of type IV secretion system no 0.29
    20 Atu4692 diguanylate cyclase no 0.28

    Or look for negative cofitness