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  • Top cofit genes for Atu3485 from Agrobacterium fabrum C58

    short chain dehydrogenase
    SEED: Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Predicted lactaldehyde dehydrogenase (EC 1.2.1.22)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1902 transketolase no 0.50
    2 Atu3532 GntR family transcriptional regulator no 0.49
    3 Atu3878 transcriptional regulator no 0.45
    4 Atu3908 GntR family transcriptional regulator no 0.45
    5 Atu4446 hypothetical protein no 0.43
    6 Atu4514 RpiR family transcriptional regulator 0.19 0.42
    7 Atu4743 LacI family transcriptional regulator 0.64 0.42
    8 Atu1422 transcriptional regulator, MarR family no 0.41
    9 Atu2821 transcriptional regulator, GntR family no 0.40
    10 Atu1417 enoyl-CoA hydratase no 0.40
    11 Atu1419 transcriptional regulator, GntR family no 0.38
    12 Atu1778 transcription-repair coupling factor no 0.37
    13 Atu1904 transcriptional regulator no 0.36
    14 Atu0062 transcriptional regulator, ROK family 0.60 0.34
    15 Atu3484 hypothetical protein 0.90 0.34
    16 Atu1705 SEC-independent protein translocase protein no 0.34
    17 Atu4841 DeoR family transcriptional regulator no 0.34
    18 Atu0801 chromosome segregation protein no 0.33
    19 Atu6021 D-nopaline dehydrogenase no 0.33
    20 Atu0962 hypothetical protein no 0.33

    Or look for negative cofitness