Top cofit genes for Atu3456 from Agrobacterium fabrum C58

ABC transporter permease
SEED: Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system ATP-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu3246		amino acid ABC transporter substrate-binding protein	no	0.22
2	Atu3810		LysR family transcriptional regulator	no	0.20
3	Atu1347		Tetracycline resistance protein, tetM/tetO subfamily	no	0.19
4	Atu1724		hypothetical protein	no	0.19
5	Atu4118		GntR family transcriptional regulator	no	0.19
6	Atu2055		HlyD family secretion protein	no	0.19
7	Atu2352		hypothetical protein	no	0.19
8	Atu3818		ribose ABC transporter ATPase	no	0.18
9	Atu0901		6-O-methylguanine-DNA methyltransferase	no	0.18
10	Atu3691		iron (III) dicitrate ABC transporter ATPase	no	0.18
11	Atu1133		ribonuclease	no	0.17
12	Atu4703		hypothetical protein	no	0.17
13	Atu4596		hypothetical protein	no	0.17
14	Atu5126		ABC transporter nucleotide binding/ATPase(putrescine)	no	0.17
15	Atu0206		hypothetical protein	no	0.17
16	Atu6092		conserved hypothetical protein	no	0.16
17	Atu1707		hypothetical protein	no	0.16
18	Atu0966		hypothetical protein	no	0.16
19	Atu4621		dipeptide ABC transporter ATPase	no	0.16
20	Atu3218		hypothetical protein	no	0.16

Or look for negative cofitness