Top cofit genes for Atu3416 from Agrobacterium fabrum C58

ABC transporter substrate binding protein
SEED: Periplasmic binding protein
KEGG: polar amino acid transport system substrate-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu4240		alkanal monooxygenase subunit alpha	no	0.18
2	Atu1717		long-chain fatty acid transport protein	no	0.15
3	Atu4294		oxidoreductase	no	0.15
4	Atu4830		hypothetical protein	no	0.14
5	Atu3721		hypothetical protein	no	0.14
6	Atu8156		hypothetical protein	no	0.14
7	Atu0567		flagellin protein FlaD	no	0.14
8	Atu4270		hypothetical protein	no	0.14
9	Atu3895		sugar ABC transporter ATPase	no	0.14
10	Atu3516		MutT family NTP pyrophosphatase	no	0.14
11	Atu1412		ABC transporter, membrane spanning protein	no	0.14
12	Atu1765		transcriptional regulator, LysR family	no	0.13
13	Atu2646		hypothetical protein	no	0.13
14	Atu2742		hypothetical protein	no	0.13
15	Atu2724		MFS permease	no	0.13
16	Atu2025		transcriptional regulator	no	0.13
17	Atu4827		ABC transporter permease	no	0.13
18	Atu6094		conserved hypothetical protein	no	0.13
19	Atu3698		thioredoxin	no	0.13
20	Atu1454		siroheme synthase	no	0.13

Or look for negative cofitness