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  • Top cofit genes for Atu3412 from Agrobacterium fabrum C58

    ABC transporter permease
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2559 transcriptional regulator, LysR family no 0.28
    2 Atu4224 sarcosine oxidase beta subunit no 0.25
    3 Atu3246 amino acid ABC transporter substrate-binding protein 0.57 0.25
    4 Atu0013 NAD(P)H-flavin oxidoreductase no 0.25
    5 Atu8117 hypothetical protein no 0.23
    6 Atu5035 hypothetical protein no 0.23
    7 Atu3669 siderophore biosynthesis protein no 0.23
    8 Atu3406 hypothetical protein no 0.22
    9 Atu4361 sugar ABC transporter substrate-binding protein no 0.22
    10 Atu3683 peptide synthetase, siderophore biosynthesis protein no 0.21
    11 Atu2179 GGDEF family protein no 0.20
    12 Atu1642 hypothetical protein no 0.20
    13 Atu4243 polyamine ABC transporter substrate-binding protein no 0.20
    14 Atu0448 hypothetical protein no 0.20
    15 Atu3408 2-haloalkanoic acid dehalogenase 0.31 0.20
    16 Atu4776 formate dehydrogenase alpha subunit no 0.20
    17 Atu2633 RhtB family transporter 0.31 0.20
    18 Atu2288 hypothetical protein no 0.19
    19 Atu4407 periplasmic nitrate reductase, NapD protein no 0.19
    20 Atu2707 rhizobiocin no 0.19

    Or look for negative cofitness