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  • Top cofit genes for Atu3356 from Agrobacterium fabrum C58

    malic enzyme
    SEED: NADP-dependent malic enzyme (EC 1.1.1.40)
    KEGG: malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3135 ABC transporter permease no 0.53
    2 Atu3138 hypothetical protein no 0.51
    3 Atu3137 C4-dicarboxylate-binding protein no 0.50
    4 Atu3139 hypothetical protein no 0.49
    5 Atu3143 hypothetical protein no 0.45
    6 Atu3142 5-keto-4-deoxyuronate isomerase no 0.39
    7 Atu3136 ABC transporter permease no 0.39
    8 Atu4541 carboxymuconolactone decarboxylase 0.43 0.38
    9 Atu4599 IclR family transcriptional regulator no 0.34
    10 Atu4194 oligopeptide ABC transporter permease no 0.32
    11 Atu3141 2-deoxy-D-gluconate 3-dehydrogenase no 0.30
    12 Atu4505 LacI family transcriptional regulator 0.62 0.30
    13 Atu0035 phosphoenolpyruvate carboxykinase 0.64 0.29
    14 Atu3740 fructose bisphosphate aldolase no 0.29
    15 Atu1620 triosephosphate isomerase 0.48 0.28
    16 Atu4195 oligopeptide ABC transporter ATPase no 0.28
    17 Atu3140 5-dehydro-4-deoxyglucarate dehydratase no 0.28
    18 Atu4192 oligopeptide ABC transporter substrate-binding protein no 0.27
    19 Atu2035 acetolactate synthase, small subunit 0.50 0.27
    20 Atu2115 pyrophosphate--fructose-6-phosphate 1-phosphotransferase 0.57 0.27

    Or look for negative cofitness