Top cofit genes for Atu3349 from Agrobacterium fabrum C58

ABC transporter permease
SEED: Nucleoside ABC transporter, permease protein 1
KEGG: multiple sugar transport system ATP-binding protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu3352		sugar ABC transporter substrate-binding protein	0.90	0.84
2	Atu3350		ABC transporter permease	0.97	0.83
3	Atu3351		sugar ABC transporter permease	0.95	0.82
4	Atu3347		hypothetical protein	0.54	0.77
5	Atu3149		sugar ABC transporter permease	no	0.73
6	Atu3147		oxidoreductase	no	0.72
7	Atu3151		sugar ABC transporter substrate-binding protein	no	0.72
8	Atu3348		hypothetical protein	0.44	0.72
9	Atu3150		sugar ABC transporter permease	no	0.69
10	Atu3152		AraC family transcriptional regulator	no	0.68
11	Atu3148		sugar ABC transporter ATPase	no	0.68
12	Atu2123		methylenetetrahydrofolate reductase	0.25	0.42
13	Atu2155		methionine synthase	0.24	0.34
14	Atu3426		sulfonate monooxygenase	no	0.27
15	Atu2274		cation efflux system protein	no	0.25
16	Atu0401		fructokinase	no	0.24
17	Atu3783		glutamate synthase subunit beta	0.22	0.24
18	Atu0047		malate synthase G	no	0.24
19	Atu3784		glutamate synthase large subunit	0.25	0.23
20	Atu2726		pyruvate carboxylase	0.27	0.23

Or look for negative cofitness