Top cofit genes for Atu3344 from Agrobacterium fabrum C58

radical activating protein
SEED: Queuosine Biosynthesis QueE Radical SAM
KEGG: queuosine biosynthesis protein QueE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu4754		amino acid ABC transporter permease	no	0.20
2	Atu2406		hypothetical protein	no	0.19
3	Atu3531		3-oxoacyl-ACP reductase	no	0.19
4	Atu1965		UDP-glucose 4-epimerase	no	0.18
5	Atu0047		malate synthase G	no	0.17
6	Atu1400		phosphoglycerate dehydrogenase	no	0.17
7	Atu1985		two component response regulator	no	0.17
8	Atu8040		hypothetical protein	no	0.17
9	Atu4069		sarcosine oxidase alpha subunit	no	0.17
10	Atu3226		GntR family transcriptional regulator	no	0.17
11	Atu0803		pyruvate,orthophosphate dikinase	no	0.16
12	Atu3213		oligopeptide ABC transporter permease	no	0.16
13	Atu3165		sorbitol/mannitol ABC transporter substrate-binding protein	no	0.16
14	Atu3564		endo-1,3-1,4-beta-glycanase	no	0.16
15	Atu4344		ATP-dependent Clp protease, ATP-binding subunit	no	0.16
16	Atu0536		hypothetical protein	no	0.16
17	Atu0608		transcriptional regulator	no	0.16
18	Atu4145		hypothetical protein	no	0.16
19	Atu2493		NAD(P)+ transhydrogenase	no	0.16
20	Atu3539		hypothetical protein	no	0.16

Or look for negative cofitness