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Cofit
Protein
Homologs
Top cofit genes for Atu3328 from
Agrobacterium fabrum C58
aldehyde dehydrogenase
SEED: Putrescine utilization regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu3329
beta alanine--pyruvate transaminase
0.54
0.71
2
Atu3292
alanine racemase
no
0.42
3
Atu3291
Lpr family transcriptional regulator
no
0.41
4
Atu3293
D-amino acid dehydrogenase small subunit
0.47
0.38
5
Atu0207
transcriptional regulator, LysR family
0.33
0.31
6
Atu0205
methylmalonate-semialdehyde dehydrogenase
0.56
0.28
7
Atu8117
hypothetical protein
no
0.25
8
Atu3299
hypothetical protein
no
0.24
9
Atu3663
hypothetical protein
no
0.24
10
Atu2427
ABC transporter, membrane spanning protein
0.29
0.24
11
Atu4407
periplasmic nitrate reductase, NapD protein
no
0.22
12
Atu1577
ABC transporter, substrate binding protein (amino acid)
no
0.22
13
Atu3401
aldehyde dehydrogenase
0.40
0.22
14
Atu2425
ABC transporter, nucleotide binding/ATPase protein
no
0.21
15
Atu3604
hypoxanthine phosphoribosyltransferase
no
0.21
16
Atu1071
hypothetical protein
no
0.21
17
Atu5150
glutathione S-transferase
no
0.21
18
Atu3912
hypothetical protein
no
0.20
19
Atu3110
hypothetical protein
no
0.20
20
Atu3880
sugar ABC transporter ATPase
no
0.20
Or look for
negative cofitness