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  • Top cofit genes for Atu3298 from Agrobacterium fabrum C58

    C4-dicarboxylate transporter DctA
    SEED: C4-dicarboxylate transport protein
    KEGG: aerobic C4-dicarboxylate transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.89
    2 Atu3296 two component response regulator for C4-dicarboxylate transport 0.96 0.88
    3 Atu0332 RNA polymerase sigma-54 factor 0.84 0.61
    4 Atu0035 phosphoenolpyruvate carboxykinase 0.81 0.45
    5 Atu4505 LacI family transcriptional regulator 0.34 0.43
    6 Atu1445 two component sensor kinase 0.47 0.42
    7 Atu2115 pyrophosphate--fructose-6-phosphate 1-phosphotransferase 0.31 0.41
    8 Atu1620 triosephosphate isomerase 0.16 0.39
    9 Atu3740 fructose bisphosphate aldolase no 0.39
    10 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase 0.46 0.34
    11 Atu4017 MFS permease 0.59 0.33
    12 Atu2758 ammonium transporter 0.81 0.31
    13 Atu2640 hypothetical protein 0.82 0.31
    14 Atu3739 phosphoglycerate kinase 0.37 0.31
    15 Atu3469 phosphoglyceromutase no 0.30
    16 Atu1446 two component response regulator 0.58 0.30
    17 Atu2416 glutamine synthetase no 0.30
    18 Atu0702 calcium-binding protein, regucalcin no 0.28
    19 Atu3905 nitrate ABC transporter substrate-binding protein 0.86 0.28
    20 Atu2790 3-isopropylmalate dehydratase, small subunit 0.44 0.27

    Or look for negative cofitness