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  • Top cofit genes for Atu3292 from Agrobacterium fabrum C58

    alanine racemase
    SEED: Alanine racemase (EC 5.1.1.1)
    KEGG: alanine racemase

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3293 D-amino acid dehydrogenase small subunit 0.47 0.85
    2 Atu3291 Lpr family transcriptional regulator no 0.81
    3 Atu3329 beta alanine--pyruvate transaminase no 0.47
    4 Atu3328 aldehyde dehydrogenase no 0.42
    5 Atu0035 phosphoenolpyruvate carboxykinase no 0.27
    6 Atu2424 ABC transporter, nucleotide binding/ATPase protein no 0.26
    7 Atu1579 ABC transporter, membrane spanning protein (amino acid) no 0.25
    8 Atu2425 ABC transporter, nucleotide binding/ATPase protein 0.22 0.25
    9 Atu4505 LacI family transcriptional regulator no 0.25
    10 Atu2678 2'-5' RNA ligase no 0.24
    11 Atu2427 ABC transporter, membrane spanning protein no 0.24
    12 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.23
    13 Atu2426 ABC transporter, membrane spanning protein (branched chain amino acid) no 0.23
    14 Atu4822 acyl-CoA synthetase 0.53 0.23
    15 Atu1620 triosephosphate isomerase no 0.23
    16 Atu3740 fructose bisphosphate aldolase no 0.22
    17 Atu3298 C4-dicarboxylate transporter DctA 0.30 0.22
    18 Atu1848 transcriptional regulator, GntR family no 0.22
    19 Atu2115 pyrophosphate--fructose-6-phosphate 1-phosphotransferase no 0.21
    20 Atu1580 ABC transporter, nucleotide binding/ATPase protein (amino acid) 0.74 0.21

    Or look for negative cofitness