Top cofit genes for Atu3225 from Agrobacterium fabrum C58

ABC transporter permease
SEED: Putative sugar ABC transport system, permease protein YjfF
KEGG: simple sugar transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu3374		amidohydrolase	no	0.25
2	Atu0944		sucrose hydrolase	no	0.24
3	Atu4292		chloramphenicol resistance protein	no	0.24
4	Atu6132		methyl-accepting chemotaxis protein	no	0.23
5	Atu8063		hypothetical protein	no	0.23
6	Atu4683		hypothetical protein	no	0.23
7	Atu3355		LysR family transcriptional regulator	no	0.23
8	Atu0321		formamidopyrimidine-DNA glycosylase	0.27	0.22
9	Atu1396		ABC transporter, nucleotide binding/ATPase protein	no	0.22
10	Atu1553		hypothetical protein	no	0.22
11	Atu3459		ABC transporter permease	no	0.21
12	Atu1905		short chain dehydrogenase	no	0.21
13	Atu4353		hypothetical protein	no	0.21
14	Atu3284		sugar ABC transporter permease	no	0.21
15	Atu4633		phosphate permease (N-terminal)	no	0.21
16	Atu1311		acetyltransferase	no	0.21
17	Atu3192		MFS permease	no	0.21
18	Atu3802		proline/glycine betaine ABC transporter ATPase	no	0.21
19	Atu1548		formate dehydrogenase H alpha subunit	no	0.21
20	Atu8152		hypothetical protein	no	0.21

Or look for negative cofitness