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  • Top cofit genes for Atu3207 from Agrobacterium fabrum C58

    diguanylate cyclase
    SEED: Uncharacterized protein ylaB

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0701 GGDEF family protein no 0.54
    2 Atu3495 diguanylate cyclase no 0.47
    3 Atu1983 hypothetical protein no 0.43
    4 Atu4490 diguanylate cyclase no 0.42
    5 Atu3496 hypothetical protein no 0.40
    6 Atu0700 two component sensor kinase no 0.39
    7 Atu0219 components of type IV pilus 0.73 0.35
    8 Atu2332 two component sensor kinase/response regulator hybrid no 0.34
    9 Atu0524 transcriptional regulator, LuxR family no 0.34
    10 Atu0221 component of type IV pilus no 0.33
    11 Atu1717 long-chain fatty acid transport protein no 0.32
    12 Atu3764 sigma 54 dependent transcriptional activator no 0.31
    13 Atu0525 transcriptional regulator, LuxR family no 0.31
    14 Atu2726 pyruvate carboxylase no 0.30
    15 Atu4692 diguanylate cyclase no 0.29
    16 Atu0215 hypothetical protein no 0.28
    17 Atu0598 phosphogluconate dehydratase no 0.28
    18 Atu2548 phosphoribosylaminoimidazole-succinocarboxamide synthase no 0.28
    19 Atu1631 two component response regulator no 0.28
    20 Atu0217 components of type IV pilus 0.68 0.28

    Or look for negative cofitness