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Cofit
Protein
Homologs
Top cofit genes for Atu3207 from
Agrobacterium fabrum C58
diguanylate cyclase
SEED: Uncharacterized protein ylaB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu0701
GGDEF family protein
no
0.57
2
Atu3495
diguanylate cyclase
no
0.50
3
Atu4490
diguanylate cyclase
no
0.45
4
Atu1983
hypothetical protein
no
0.42
5
Atu3496
hypothetical protein
no
0.41
6
Atu0700
two component sensor kinase
no
0.41
7
Atu0219
components of type IV pilus
0.73
0.38
8
Atu0524
transcriptional regulator, LuxR family
no
0.37
9
Atu2332
two component sensor kinase/response regulator hybrid
no
0.36
10
Atu0221
component of type IV pilus
no
0.35
11
Atu0525
transcriptional regulator, LuxR family
no
0.33
12
Atu1717
long-chain fatty acid transport protein
no
0.33
13
Atu3764
sigma 54 dependent transcriptional activator
no
0.31
14
Atu2726
pyruvate carboxylase
no
0.30
15
Atu2038
hypothetical protein
no
0.30
16
Atu4692
diguanylate cyclase
no
0.30
17
Atu2548
phosphoribosylaminoimidazole-succinocarboxamide synthase
no
0.30
18
Atu0217
components of type IV pilus
0.68
0.29
19
Atu0215
hypothetical protein
no
0.28
20
Atu0598
phosphogluconate dehydratase
no
0.28
Or look for
negative cofitness