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  • Top cofit genes for Atu3202 from Agrobacterium fabrum C58

    RND multidrug efflux transporter
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3203 RND multidrug efflux membrane permease 1.00 0.90
    2 Atu1118 ABC transporter, nucleotide binding/ATPase protein 0.37 0.51
    3 Atu2590 hypothetical protein no 0.47
    4 Atu2551 RND multidrug efflux transporter 0.64 0.46
    5 Atu0388 two component sensor kinase 0.41 0.45
    6 Atu2591 glucosyltransferase no 0.45
    7 Atu2577 ABC transporter, nucleotide binding/ATPase protein no 0.45
    8 Atu2583 glycosyltransferase no 0.44
    9 Atu4149 UDP-glucose 6-dehydrogenase 0.40 0.44
    10 Atu2592 hypothetical protein no 0.44
    11 Atu2584 hypothetical protein no 0.43
    12 Atu4148 UDP-glucuronic acid epimerase 0.14 0.43
    13 Atu2582 UDP-glucose/GDP-mannose dehydrogenase no 0.43
    14 Atu2550 RND multidrug efflux membrane permease no 0.42
    15 Atu4738 chloramphenicol acetyltransferase no 0.42
    16 Atu2585 hypothetical protein no 0.40
    17 Atu1131 outer membrane protein no 0.38
    18 Atu0687 hypothetical protein no 0.35
    19 Atu0353 acetyltransferase no 0.34
    20 Atu3779 lytic murein transglycosylase 0.63 0.34

    Or look for negative cofitness