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  • Top cofit genes for Atu3162 from Agrobacterium fabrum C58

    LacI family transcriptional regulator
    SEED: Ribose operon repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3166 fructokinase 0.62 0.66
    2 Atu4453 ribitol kinase no 0.50
    3 Atu4743 LacI family transcriptional regulator no 0.49
    4 Atu4446 hypothetical protein no 0.45
    5 Atu1904 transcriptional regulator no 0.39
    6 Atu4447 sorbitol ABC transporter substrate-binding protein no 0.33
    7 Atu0062 transcriptional regulator, ROK family 0.40 0.33
    8 Atu5464 IclR family transcriptional regulator no 0.31
    9 Atu0981 glutamate-ammonia-ligase adenylyltransferase no 0.30
    10 Atu3485 short chain dehydrogenase no 0.30
    11 Atu4449 sorbitol/mannitol ABC transporter permease no 0.29
    12 Atu5075 GntR family transcriptional regulator no 0.29
    13 Atu4514 RpiR family transcriptional regulator no 0.29
    14 Atu2606 transcriptional regulator, GntR family 0.32 0.28
    15 Atu4099 hypothetical protein no 0.27
    16 Atu4448 sorbitol/mannitol ABC transporter permease no 0.27
    17 Atu1902 transketolase no 0.26
    18 Atu3815 GntR family transcriptional regulator no 0.26
    19 Atu5125 GntR family transcriptional regulator no 0.26
    20 Atu4450 sugar ABC transporter ATPase no 0.25

    Or look for negative cofitness