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  • Top cofit genes for Atu3088 from Agrobacterium fabrum C58

    spermidine/putrescine ABC transporter substrate-binding protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: putative spermidine/putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu4833 glucoamylase no 0.58
    2 Atu4834 6-phosphogluconate dehydrogenase no 0.56
    3 Atu3065 sugar ABC transporter permease no 0.56
    4 Atu4805 two component sensor kinase/response regulator hybrid no 0.56
    5 Atu3059 Na+/H+ antiporter no 0.56
    6 Atu4842 sugar ABC transporter substrate-binding protein no 0.55
    7 Atu4816 glycosyltransferase no 0.54
    8 Atu4846 hypothetical protein no 0.52
    9 Atu3061 diguanylate cyclase no 0.52
    10 Atu4811 UDP-phosphate alpha N-acetylglucosaminyltransferase no 0.52
    11 Atu4826 ABC transporter substrate binding protein no 0.52
    12 Atu4821 3-oxoacyl-ACP reductase no 0.52
    13 Atu4827 ABC transporter permease no 0.51
    14 Atu3060 ABC transporter permease no 0.51
    15 Atu4800 hypothetical protein no 0.51
    16 Atu3070 allantoate amidohydrolase no 0.50
    17 Atu8097 hypothetical protein no 0.50
    18 Atu4813 hypothetical protein no 0.50
    19 Atu4817 glycosyltransferase no 0.50
    20 Atu4843 sugar ABC transporter ATPase no 0.49

    Or look for negative cofitness