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  • Top cofit genes for Atu2817 from Agrobacterium fabrum C58

    ABC transporter, substrate binding protein (ribose)
    SEED: Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
    KEGG: ribose transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2819 ABC transporter, nucleotide binding/ATPase protein (ribose) no 0.81
    2 Atu2816 oxidoreductase no 0.73
    3 Atu2815 hypothetical protein no 0.70
    4 Atu2818 ABC transporter, membrane spanning protein (ribose) no 0.68
    5 Atu2822 D-galactarate dehydratase 0.24 0.62
    6 Atu2813 altronate oxidoreductase no 0.50
    7 Atu2814 zinc-binding dehydrogenase no 0.43
    8 Atu2741 hypothetical protein no 0.39
    9 Atu0014 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase no 0.36
    10 Atu2296 2-dehydro-3-deoxygluconokinase no 0.36
    11 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein no 0.28
    12 Atu3672 polyketide synthase no 0.27
    13 Atu3683 peptide synthetase, siderophore biosynthesis protein no 0.27
    14 Atu3670 siderophore biosynthesis protein no 0.26
    15 Atu3671 siderophore biosynthesis protein no 0.25
    16 Atu0405 long-chain-fatty-acid-CoA-ligase no 0.24
    17 Atu3673 siderophore biosynthesis protein no 0.24
    18 Atu2022 NADP-dependent alcohol dehydrogenase no 0.23
    19 Atu1791 ABC transporter, membrane spanning protein (sugar) no 0.23
    20 Atu3496 hypothetical protein no 0.22

    Or look for negative cofitness