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  • Top cofit genes for Atu2758 from Agrobacterium fabrum C58

    ammonium transporter
    SEED: Ammonium transporter
    KEGG: ammonium transporter, Amt family

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0332 RNA polymerase sigma-54 factor 0.99 0.45
    2 Atu2757 nitrogen regulatory protein PII 0.90 0.37
    3 Atu1445 two component sensor kinase 0.85 0.36
    4 Atu2416 glutamine synthetase no 0.35
    5 Atu3695 hypothetical protein no 0.34
    6 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein no 0.34
    7 Atu1791 ABC transporter, membrane spanning protein (sugar) no 0.33
    8 Atu3676 siderophore biosynthesis protein no 0.33
    9 Atu3298 C4-dicarboxylate transporter DctA 0.81 0.31
    10 Atu2398 urease accessory protein no 0.31
    11 Atu4847 ribokinase 0.50 0.30
    12 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.30
    13 Atu0035 phosphoenolpyruvate carboxykinase 0.74 0.29
    14 Atu3673 siderophore biosynthesis protein no 0.29
    15 Atu0128 ABC transporter, membrane spanning protein (sugar/ribonucleotide) no 0.29
    16 Atu3675 peptide synthetase, siderophore biosynthesis protein no 0.29
    17 Atu2408 urease accessory protein no 0.29
    18 Atu0079 Atu0079-1 mutant of pfkB family carbohydrate kinase no 0.29
    19 Atu3670 siderophore biosynthesis protein no 0.28
    20 Atu4799 dTDP-4-dehydrorhamnose 3,5-epimerase 0.26 0.28

    Or look for negative cofitness