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  • Top cofit genes for Atu2673 from Agrobacterium fabrum C58

    hypothetical protein
    SEED: Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase N

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu2549 transcriptional regulator, TetR family no 0.61
    2 Atu3201 TetR family transcriptional regulator 0.33 0.59
    3 Atu3795 AcrB/AcrD/AcrF family protein 0.60 0.50
    4 Atu3796 efflux protein 0.58 0.47
    5 Atu3797 HlyD family secretion protein no 0.44
    6 Atu2720 monofunctional biosynthesis peptidoglycan transglycosylase no 0.43
    7 Atu0657 hypothetical protein 0.50 0.40
    8 Atu3609 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.37
    9 Atu1134 hypothetical protein 0.73 0.36
    10 Atu1662 hypothetical protein no 0.36
    11 Atu0689 ribosomal large subunit pseudouridine synthase B 0.54 0.33
    12 Atu2772 Invasion protein A 0.21 0.33
    13 Atu5119 two component response regulator no 0.33
    14 Atu0340 SAM dependent methyltransferase 0.30 0.32
    15 Atu1993 tRNA/rRNA metyltransferase no 0.31
    16 Atu1799 hypothetical protein no 0.29
    17 Atu5165 type IV secretion protein AvhB4 0.26 0.29
    18 Atu2548 phosphoribosylaminoimidazole-succinocarboxamide synthase 0.73 0.27
    19 Atu5129 ABC transporter substrate binding protein (mannopine) no 0.27
    20 Atu5118 hypothetical protein no 0.27

    Or look for negative cofitness