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  • Top cofit genes for Atu2348 from Agrobacterium fabrum C58

    sugar binding protein
    SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
    KEGG: putative multiple sugar transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu6166 two component sensor kinase no 0.64
    2 Atu2349 hypothetical protein no 0.64
    3 Atu6178 two component response regulator no 0.59
    4 Atu6164 trans-zeatin secretion protein no 0.34
    5 Atu0825 quinone oxidoreductase no 0.27
    6 Atu0731 divalent cation transporter no 0.24
    7 Atu2347 ABC transporter, nucleotide binding/ATPase protein (sugar) 0.97 0.24
    8 Atu2346 ABC transporter, membrane spanning protein (sugar) 0.96 0.23
    9 Atu4655 ROK family transcriptional regulator no 0.23
    10 Atu1990 bacteriophytochrome protein no 0.22
    11 Atu1446 two component response regulator 0.22 0.21
    12 Atu3576 xylose ABC transporter substrate-binding protein 0.73 0.21
    13 Atu2393 Acr family transporter no 0.20
    14 Atu0637 proteinase sohB no 0.19
    15 Atu3575 xylose ABC transporter permease 0.38 0.19
    16 Atu3495 diguanylate cyclase no 0.18
    17 Atu3574 xylose ABC transporter ATPase 0.33 0.18
    18 Atu4272 acetyl-CoA carboxylase biotin carboxyl carrier protein no 0.18
    19 Atu1788 transcriptional regulator, GntR family no 0.18
    20 Atu1060 two component response regulator no 0.18

    Or look for negative cofitness