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  • Top cofit genes for Atu2268 from Agrobacterium fabrum C58

    ECF family sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3299 hypothetical protein no 0.38
    2 Atu2707 rhizobiocin no 0.29
    3 Atu2524 hypothetical protein no 0.29
    4 Atu5023 hypothetical protein no 0.28
    5 Atu8117 hypothetical protein no 0.27
    6 Atu1116 two component response regulator no 0.27
    7 Atu0101 cytochrome c no 0.27
    8 Atu3688 iron(III ABC transporter permease dicitrate ABC transporter permease no 0.26
    9 Atu2579 metal dependant beta lactamase protein no 0.26
    10 Atu4393 3-octaprenyl-4-hydroxybenzoate carboxy-lyase no 0.26
    11 Atu0213 nicotinate phosphoribosyltransferase no 0.25
    12 Atu4407 periplasmic nitrate reductase, NapD protein no 0.25
    13 Atu3189 hypothetical protein no 0.24
    14 Atu0392 ABC transporter, membrane spanning protein no 0.24
    15 Atu2655 hypothetical protein no 0.24
    16 Atu1790 ABC transporter, membrane spanning protein (sugar) no 0.24
    17 Atu1531 hypothetical protein 0.51 0.24
    18 Atu2588 ABC transporter, membrane spanning protein (oligopeptide) no 0.24
    19 Atu2235 hypothetical protein no 0.24
    20 Atu1074 NAD/NADP dependent oxidoreductase no 0.24

    Or look for negative cofitness