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  • Top cofit genes for Atu2268 from Agrobacterium fabrum C58

    ECF family sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3299 hypothetical protein no 0.39
    2 Atu2707 rhizobiocin no 0.29
    3 Atu1116 two component response regulator no 0.28
    4 Atu2524 hypothetical protein no 0.27
    5 Atu5023 hypothetical protein no 0.27
    6 Atu0101 cytochrome c no 0.27
    7 Atu4393 3-octaprenyl-4-hydroxybenzoate carboxy-lyase no 0.27
    8 Atu0392 ABC transporter, membrane spanning protein no 0.27
    9 Atu8117 hypothetical protein no 0.27
    10 Atu2579 metal dependant beta lactamase protein no 0.26
    11 Atu1531 hypothetical protein 0.51 0.26
    12 Atu3688 iron(III ABC transporter permease dicitrate ABC transporter permease no 0.26
    13 Atu4407 periplasmic nitrate reductase, NapD protein no 0.25
    14 Atu0213 nicotinate phosphoribosyltransferase no 0.25
    15 Atu2588 ABC transporter, membrane spanning protein (oligopeptide) no 0.24
    16 Atu0533 putative inhibitor of septum formation no 0.24
    17 Atu2720 monofunctional biosynthesis peptidoglycan transglycosylase no 0.24
    18 Atu3189 hypothetical protein no 0.24
    19 Atu3604 hypoxanthine phosphoribosyltransferase no 0.24
    20 Atu3663 hypothetical protein no 0.24

    Or look for negative cofitness