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  • Top cofit genes for Atu2145 from Agrobacterium fabrum C58

    transcriptional regulator, RpiR family
    SEED: Transcriptional regulator, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3140 5-dehydro-4-deoxyglucarate dehydratase no 0.24
    2 Atu2753 ATP-dependent helicase no 0.23
    3 Atu3139 hypothetical protein no 0.22
    4 Atu3136 ABC transporter permease no 0.21
    5 Atu3137 C4-dicarboxylate-binding protein no 0.20
    6 Atu4685 LacI family transcriptional regulator no 0.20
    7 Atu4624 GntR family transcriptional regulator no 0.20
    8 Atu3138 hypothetical protein no 0.20
    9 Atu3135 ABC transporter permease no 0.20
    10 Atu3338 trehalose/maltose ABC transporter substrate-binding protein no 0.19
    11 Atu3342 trehalose utilization-like protein no 0.18
    12 Atu3343 trehalose utilization-like protein no 0.18
    13 Atu4733 hypothetical protein no 0.18
    14 Atu3339 trehalose/maltose ABC transporter permease no 0.17
    15 Atu0770 cytochrome C oxidase assembly protein no 0.17
    16 Atu2600 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) no 0.17
    17 Atu3143 hypothetical protein no 0.17
    18 Atu3340 trehalose/maltose ABC transporter permease no 0.17
    19 Atu3341 trehalose/maltose ABC transporter ATPase no 0.16
    20 Atu3141 2-deoxy-D-gluconate 3-dehydrogenase no 0.16

    Or look for negative cofitness