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Cofit
Protein
Homologs
Top cofit genes for Atu2135 from
Agrobacterium fabrum C58
transcriptional regulator, TetR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu0279
transcriptional regulator, TetR family
no
0.27
2
Atu1865
hypothetical protein
no
0.23
3
Atu1446
two component response regulator
0.60
0.20
4
Atu3372
sugar ABC transporter substrate-binding protein
no
0.19
5
Atu1765
transcriptional regulator, LysR family
0.38
0.19
6
Atu4266
GntR family transcriptional regulator
no
0.19
7
Atu1483
cytochrome b561
no
0.19
8
Atu5078
LacI family transcription regulator
no
0.18
9
Atu0823
ABC transporter, nucleotide binding/ATPase protein
no
0.18
10
Atu1045
hypothetical protein
no
0.18
11
Atu0493
hypothetical protein
0.57
0.18
12
Atu3704
hypothetical protein
no
0.18
13
Atu1445
two component sensor kinase
no
0.18
14
Atu4683
hypothetical protein
no
0.18
15
Atu0332
RNA polymerase sigma-54 factor
no
0.17
16
Atu5522
hypothetical protein
no
0.17
17
Atu5445
oxidoreductase
no
0.17
18
Atu1792
ABC transporter, nucleotide binding/ATPase protein (sugar)
no
0.17
19
Atu0345
DNA mismatch repair protein, MutS family
no
0.17
20
Atu1054
hypothetical protein
no
0.17
Or look for
negative cofitness