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Cofit
Protein
Homologs
Top cofit genes for Atu2011 from
Agrobacterium fabrum C58
hypothetical protein
SEED: Exonuclease III
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu4171
cold-shock dead-box protein A
no
0.21
2
Atu1129
excinuclease ABC chain C
no
0.20
3
Atu0482
polysaccharide deacetylase
no
0.20
4
Atu2001
excinuclease ABC subunit B
no
0.19
5
Atu2373
UDP-hexose transferase
no
0.19
6
Atu4162
two-component response regulator
0.35
0.19
7
Atu1778
transcription-repair coupling factor
0.32
0.19
8
Atu2372
UDP-hexose transferase
no
0.18
9
Atu8112
hypothetical protein
no
0.18
10
Atu0481
exopolysaccharide production protein
no
0.18
11
Atu1513
ABC excinuclease subunit A
0.38
0.18
12
Atu0051
two component sensor kinase
no
0.18
13
Atu8085
hypothetical protein
no
0.17
14
Atu4277
LamB/YcsF family protein
no
0.17
15
Atu1236
polysaccharide biosynthesis glycosyltransferase
no
0.17
16
Atu0050
two component response regulator
no
0.17
17
Atu6189
protein secretion chaperone
no
0.17
18
Atu2112
soluble lytic transglycosylase
no
0.16
19
Atu4133
hypothetical protein
no
0.16
20
Atu3206
hypothetical protein
no
0.16
Or look for
negative cofitness