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  • Top cofit genes for Atu1982 from Agrobacterium fabrum C58

    sigma factor
    SEED: RNA polymerase sigma-70 factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1235 hypothetical protein no 0.26
    2 Atu2377 succinoglycan biosynthesis transport protein no 0.24
    3 Atu1236 polysaccharide biosynthesis glycosyltransferase no 0.24
    4 Atu3776 hypothetical protein no 0.24
    5 Atu1237 glycosyl transferase no 0.23
    6 Atu1240 hypothetical protein no 0.21
    7 Atu0530 UDP-galactose 4-epimerase no 0.21
    8 Atu2370 hypothetical protein no 0.21
    9 Atu0153 transcriptional regulator, Fur family no 0.21
    10 Atu1977 amine oxidase, flavin-containing no 0.21
    11 Atu3860 hypothetical protein no 0.20
    12 Atu2375 UDP-hexose transferase no 0.19
    13 Atu0481 exopolysaccharide production protein no 0.19
    14 Atu4160 RNA polymerase sigma factor no 0.19
    15 Atu3778 UTP-glucose-1-phosphate uridylyltransferase no 0.18
    16 Atu2373 UDP-hexose transferase no 0.18
    17 Atu5464 IclR family transcriptional regulator no 0.18
    18 Atu3175 hypothetical protein no 0.18
    19 Atu1644 hypothetical protein no 0.17
    20 Atu3594 hypothetical protein no 0.17

    Or look for negative cofitness