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  • Top cofit genes for Atu1879 from Agrobacterium fabrum C58

    ABC transporter, substrate binding protein (amino acid)
    SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1881 ABC transporter, membrane spanning protein (amino acid) 0.85 0.33
    2 Atu3658 MerR family transcriptional regulator no 0.31
    3 Atu1967 hypothetical protein no 0.30
    4 Atu1877 OmpA family protein no 0.27
    5 Atu3646 hypothetical protein no 0.26
    6 Atu0692 glutathione-regulated potassium-efflux system protein no 0.25
    7 Atu1544 hypothetical protein no 0.25
    8 Atu4113 dipeptide ABC transporter substrate-binding protein 0.32 0.24
    9 Atu3732 hemolysin no 0.24
    10 Atu3390 ABC transporter substrate-binding protein no 0.23
    11 Atu4501 hypothetical protein no 0.23
    12 Atu1898 ABC transporter, nucleotide binding/ATPase protein (ribose) no 0.22
    13 Atu2685 aconitate hydratase 0.33 0.22
    14 Atu1837 transcriptional regulator no 0.22
    15 Atu1917 hypothetical protein no 0.22
    16 Atu0125 peptide methionine sulfoxide reductase 0.33 0.21
    17 Atu0359 hemolysin no 0.21
    18 Atu1817 hypothetical protein no 0.21
    19 Atu2147 ABC transporter, substrate binding protein no 0.21
    20 Atu3791 L-asparaginase no 0.21

    Or look for negative cofitness