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  • Top cofit genes for Atu1791 from Agrobacterium fabrum C58

    ABC transporter, membrane spanning protein (sugar)
    SEED: Nucleoside ABC transporter, permease protein 1
    KEGG: simple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein no 0.44
    2 Atu3683 peptide synthetase, siderophore biosynthesis protein no 0.37
    3 Atu2758 ammonium transporter no 0.34
    4 Atu3673 siderophore biosynthesis protein no 0.33
    5 Atu3675 peptide synthetase, siderophore biosynthesis protein no 0.33
    6 Atu0332 RNA polymerase sigma-54 factor no 0.32
    7 Atu1792 ABC transporter, nucleotide binding/ATPase protein (sugar) 0.73 0.31
    8 Atu3695 hypothetical protein 0.34 0.31
    9 Atu1800 hypothetical protein no 0.31
    10 Atu2743 hypothetical protein 0.23 0.30
    11 Atu3671 siderophore biosynthesis protein no 0.30
    12 Atu1445 two component sensor kinase no 0.29
    13 Atu6069 ABC transporter, nucleotide binding/ATPase protein (ribose) no 0.29
    14 Atu3672 polyketide synthase no 0.28
    15 Atu1789 lipoprotein 0.87 0.28
    16 Atu0128 ABC transporter, membrane spanning protein (sugar/ribonucleotide) no 0.28
    17 Atu3681 polyketide synthase no 0.28
    18 Atu3670 siderophore biosynthesis protein no 0.27
    19 Atu0035 phosphoenolpyruvate carboxykinase no 0.27
    20 Atu3469 phosphoglyceromutase no 0.27

    Or look for negative cofitness