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  • Top cofit genes for Atu1789 from Agrobacterium fabrum C58

    lipoprotein
    SEED: Nucleoside ABC transporter, periplasmic nucleoside-binding protein
    KEGG: simple sugar transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3671 siderophore biosynthesis protein no 0.30
    2 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein no 0.29
    3 Atu3683 peptide synthetase, siderophore biosynthesis protein no 0.27
    4 Atu1791 ABC transporter, membrane spanning protein (sugar) 0.87 0.27
    5 Atu3681 polyketide synthase no 0.26
    6 Atu1455 hypothetical protein no 0.25
    7 Atu3685 thioesterase, siderophore biosynthesis protein no 0.25
    8 Atu8034 hypothetical protein no 0.25
    9 Atu1456 sulfite reductase (NADPH) hemoprotein beta-component 0.65 0.24
    10 Atu2650 glycerol-3-phosphate dehydrogenase no 0.24
    11 Atu1808 UDP-glucose:ceramide glycosyltransferase no 0.24
    12 Atu3675 peptide synthetase, siderophore biosynthesis protein no 0.24
    13 Atu1790 ABC transporter, membrane spanning protein (sugar) 0.79 0.24
    14 Atu1454 siroheme synthase no 0.23
    15 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.29 0.23
    16 Atu4097 L-aspartate oxidase 0.42 0.22
    17 Atu1756 hypothetical protein no 0.22
    18 Atu4098 quinolinate synthetase no 0.22
    19 Atu2015 aminotransferase 0.59 0.22
    20 Atu3673 siderophore biosynthesis protein no 0.22

    Or look for negative cofitness