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  • Top cofit genes for Atu1645 from Agrobacterium fabrum C58

    ABC transporter, substrate binding protein
    SEED: ABC-type transport system involved in resistance to organic solvents, periplasmic component
    KEGG: putative ABC transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1647 ABC transporter, membrane spanning protein 0.92 0.90
    2 Atu1646 ABC transporter, nucleotide binding/ATPase protein 0.88 0.88
    3 Atu1644 hypothetical protein 0.89 0.80
    4 Atu0979 two component sensor kinase 0.45 0.62
    5 Atu0978 two component response regulator 0.45 0.60
    6 Atu3544 arsenical pump membrane protein no 0.52
    7 Atu1902 transketolase no 0.48
    8 Atu3908 GntR family transcriptional regulator no 0.48
    9 Atu2522 agrobacterium chromosomal virulence protein B no 0.48
    10 Atu0780 hypothetical protein no 0.48
    11 Atu2521 Protein regulated by acid pH no 0.47
    12 Atu3353 mannose-1-phosphate guanylyltransferase no 0.47
    13 Atu3279 methanesulfonate sulfonatase no 0.47
    14 Atu2183 lipopolysaccharide core biosynthesis mannosyltransferase no 0.47
    15 Atu3779 lytic murein transglycosylase no 0.47
    16 Atu3311 phosphomannose isomerase no 0.47
    17 Atu3634 penicillin-binding protein dacf precursor no 0.46
    18 Atu0153 transcriptional regulator, Fur family no 0.46
    19 Atu2379 phosphomannomutase no 0.45
    20 Atu2730 beta (1-->2) glucan biosynthesis protein 0.59 0.45

    Or look for negative cofitness