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  • Top cofit genes for Atu1445 from Agrobacterium fabrum C58

    two component sensor kinase
    SEED: Nitrogen regulation protein NtrB (EC 2.7.13.3)
    KEGG: two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0332 RNA polymerase sigma-54 factor 0.53 0.69
    2 Atu1446 two component response regulator 0.95 0.64
    3 Atu1444 nitrogen regulation protein 0.81 0.62
    4 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase 0.91 0.55
    5 Atu2416 glutamine synthetase 0.37 0.45
    6 Atu3298 C4-dicarboxylate transporter DctA 0.35 0.42
    7 Atu0035 phosphoenolpyruvate carboxykinase 0.44 0.42
    8 Atu0017 N-(5-phosphoribosyl) anthranilate isomerase 0.39 0.41
    9 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.40
    10 Atu2790 3-isopropylmalate dehydratase, small subunit 0.38 0.40
    11 Atu1688 indole-3-glycerol-phosphate synthase 0.67 0.40
    12 Atu3469 phosphoglyceromutase no 0.40
    13 Atu8115 Hypothetical Protein no 0.39
    14 Atu0043 imidazoleglycerol-phosphate dehydratase 0.69 0.38
    15 Atu1457 hypothetical protein no 0.38
    16 Atu1687 anthranilate phosphoribosyltransferase 0.68 0.38
    17 Atu3739 phosphoglycerate kinase no 0.38
    18 Atu3707 phosphoserine aminotransferase 0.66 0.38
    19 Atu1620 triosephosphate isomerase no 0.38
    20 Atu2791 3-isopropylmalate dehydrogenase 0.42 0.37

    Or look for negative cofitness