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  • Top cofit genes for Atu1444 from Agrobacterium fabrum C58

    nitrogen regulation protein
    SEED: tRNA dihydrouridine synthase B (EC 1.-.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1445 two component sensor kinase 0.81 0.62
    2 Atu1446 two component response regulator 0.83 0.41
    3 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase 0.80 0.37
    4 Atu0332 RNA polymerase sigma-54 factor 0.68 0.33
    5 Atu2416 glutamine synthetase no 0.33
    6 Atu3614 glyoxalase II 0.56 0.28
    7 Atu3682 non-ribosomal peptide synthetase, siderophore biosynthesis protein no 0.28
    8 Atu0128 ABC transporter, membrane spanning protein (sugar/ribonucleotide) no 0.27
    9 Atu3297 two component sensor kinase for C4-dicarboxylate transport no 0.27
    10 Atu4077 glycogen branching protein 0.33 0.26
    11 Atu3902 nitrite reductase large subunit 0.45 0.25
    12 Atu1788 transcriptional regulator, GntR family no 0.25
    13 Atu3597 3-hydroxybutyryl-CoA dehydrogenase 0.55 0.25
    14 Atu3670 siderophore biosynthesis protein no 0.24
    15 Atu4471 ABC transporter substrate-binding protein no 0.23
    16 Atu3298 C4-dicarboxylate transporter DctA 0.44 0.23
    17 Atu3683 peptide synthetase, siderophore biosynthesis protein no 0.23
    18 Atu1764 methylenetetrahydrofolate reductase no 0.23
    19 Atu0830 choline dehydrogenase 0.47 0.22
    20 Atu3684 siderophore biosynthesis protein no 0.22

    Or look for negative cofitness