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  • Top cofit genes for Atu1413 from Agrobacterium fabrum C58

    ABC transporter, substrate binding protein (branched chain amino acid)
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1411 ABC transporter, nucleotide binding/ATPase protein 0.53 0.28
    2 Atu1393 hypothetical protein no 0.24
    3 Atu4235 amino acid ABC transporter ATPase/permease no 0.23
    4 Atu5162 type IV secretion protein AvhB1 no 0.22
    5 Atu1047 ABC transporter, nucleotide binding/ATPase protein no 0.22
    6 Atu1412 ABC transporter, membrane spanning protein no 0.21
    7 Atu3374 amidohydrolase no 0.21
    8 Atu1396 ABC transporter, nucleotide binding/ATPase protein no 0.20
    9 Atu8187 hypothetical protein no 0.20
    10 Atu1641 hypothetical protein no 0.20
    11 Atu1400 phosphoglycerate dehydrogenase no 0.20
    12 Atu4655 ROK family transcriptional regulator no 0.19
    13 Atu8146 hypothetical protein no 0.19
    14 Atu3537 hypothetical protein no 0.19
    15 Atu4156 aliphatic sulfonate ABC transporter ATPase no 0.19
    16 Atu3225 ABC transporter permease no 0.19
    17 Atu1416 long-chain-fatty-acid-CoA-ligase 0.29 0.19
    18 Atu4328 hypothetical protein no 0.18
    19 Atu8186 cellulose synthesis protein no 0.18
    20 Atu6168 component of type IV secretion system, pilin subunit no 0.18

    Or look for negative cofitness