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  • Top cofit genes for Atu1372 from Agrobacterium fabrum C58

    hypothetical protein
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1589 aminotransferase, class I 0.97 0.52
    2 Atu3290 phosphomethylpyrimidine kinase 0.79 0.51
    3 Atu4098 quinolinate synthetase no 0.51
    4 Atu4096 nicotinate-nucleotide pyrophosphorylase no 0.50
    5 Atu2015 aminotransferase 0.57 0.50
    6 Atu3731 5-formyltetrahydrofolate cyclo-ligase no 0.49
    7 Atu4097 L-aspartate oxidase no 0.49
    8 Atu2569 thiamine biosynthesis protein 0.78 0.49
    9 Atu3288 hydroxyethylthiazole kinase no 0.49
    10 Atu1748 NIFU-like protein 0.29 0.49
    11 Atu2747 hypothetical protein 0.72 0.48
    12 Atu3784 glutamate synthase large subunit 0.97 0.48
    13 Atu3783 glutamate synthase subunit beta 0.96 0.48
    14 Atu2264 2-isopropylmalate synthase 0.69 0.48
    15 Atu2709 3-isopropylmalate dehydratase, large subunit 0.98 0.48
    16 Atu0432 O-succinylhomoserine sulfhydrylase 0.67 0.48
    17 Atu2791 3-isopropylmalate dehydrogenase 0.97 0.48
    18 Atu1686 peptidyl-prolyl cis-trans isomerse D no 0.47
    19 Atu0099 prephenate dehydratase 0.68 0.47
    20 Atu3739 phosphoglycerate kinase 0.48 0.47

    Or look for negative cofitness