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Cofit
Protein
Homologs
Top cofit genes for Atu1248 from
Agrobacterium fabrum C58
hypothetical protein
SEED: Integral membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu1877
OmpA family protein
no
0.27
2
Atu2522
agrobacterium chromosomal virulence protein B
no
0.24
3
Atu3658
MerR family transcriptional regulator
no
0.24
4
Atu2521
Protein regulated by acid pH
no
0.23
5
Atu1900
ABC transporter, membrane spanning protein (ribose)
no
0.22
6
Atu3646
hypothetical protein
no
0.22
7
Atu3228
DNA polymerase III subunit alpha
no
0.22
8
Atu3654
hypothetical protein
no
0.21
9
Atu5108
conjugal transfer coupling protein TraG
no
0.21
10
Atu3662
hypothetical protein
no
0.21
11
Atu3636
hypothetical protein
no
0.21
12
Atu0468
hypothetical protein
no
0.20
13
Atu1357
hypothetical protein
0.54
0.20
14
Atu1879
ABC transporter, substrate binding protein (amino acid)
no
0.20
15
Atu0437
hypothetical protein
no
0.20
16
Atu0457
hypothetical protein
no
0.19
17
Atu1896
hypothetical protein
no
0.19
18
Atu2064
hypothetical protein
no
0.19
19
Atu5102
hypothetical protein
no
0.19
20
Atu1986
two component sensor kinase
no
0.19
Or look for
negative cofitness